Method to get the circuit

The circuit file should contain three columns with headers, "Source" "Target" "Type" Here "Source" and "Target" are the names of the genes and "Type" refers to the regulation, "1" if source activates target and "2" if source inhibits target.

sracipeCircuit(.object)

# S4 method for RacipeSE
sracipeCircuit(.object)

Arguments

.object	RacipeSE object

Value

A dataframe

Examples

rs <- RacipeSE()
data("demoCircuit")
sracipeCircuit(rs) <- demoCircuit
#> circuit file successfully loaded
circuitDataFrame <- sracipeCircuit(rs)
rm(rs, demoCircuit,circuitDataFrame)
#> Warning: object 'demoCircuit' not found